Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal replication protein n | DM102_09175 | Not Available | Positive | 1805253 - 1805567 | 11472.9 |
| 30s ribosomal protein s18 | DM102_09180 | Not Available | Positive | 1805572 - 1805799 | 8986.94 |
| 50s ribosomal protein l9 | DM102_09185 | Not Available | Positive | 1805841 - 1806290 | 15770.0 |
| duf2686 family protein | DM102_09190 | Not Available | Negative | 1806361 - 1807155 | 29746.0 |
| transposase | DM102_09200 | Not Available | Positive | 1808220 - 1808386 | 6552.98 |
| antirestriction protein | DM102_09205 | Not Available | Positive | 1808387 - 1808743 | 13593.1 |
| dna repair protein radc | DM102_09210 | Not Available | Positive | 1808789 - 1809235 | 16559.0 |
| duf987 domain-containing protein | DM102_09215 | Not Available | Positive | 1809298 - 1809519 | 8427.25 |
| type iv toxin-antitoxin system yeeu family antitoxin | DM102_09220 | Not Available | Positive | 1809593 - 1809961 | 13626.3 |
| hypothetical protein | DM102_09230 | Not Available | Positive | 1810423 - 1810614 | 6827.95 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





