Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DM102_22960 | Not Available | Positive | 4501287 - 4501502 | 8408.22 |
| Gp245 | DM102_22965 | Not Available | Positive | 4501481 - 4502617 | 43030.8 |
| spermidine/putrescine abc transporter permease potb | DM102_22970 | Not Available | Positive | 4502601 - 4503464 | 32398.4 |
| Tail fiber assembly protein | DM102_22975 | Not Available | Negative | 4503696 - 4503962 | 10229.8 |
| class i sam-dependent methyltransferase | DM102_22980 | Not Available | Positive | 4504061 - 4504687 | 22991.5 |
| nucleocapsid protein | DM102_22985 | Not Available | Negative | 4504632 - 4504769 | 5261.65 |
| Tail fiber assembly protein | DM102_22990 | Not Available | Negative | 4504742 - 4504840 | 3654.39 |
| Hypothetical protein | DM102_22995 | Not Available | Negative | 4504880 - 4505173 | 10843.3 |
| Hypothetical protein | DM102_23000 | Not Available | Negative | 4505183 - 4505461 | 11178.8 |
| Putative tail fiber protein | DM102_23005 | Not Available | Negative | 4505458 - 4507521 | 73411.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





