Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | DM102_07040 | Not Available | Negative | 1382054 - 1384333 | 82405.2 |
| transaldolase | DM102_07045 | Not Available | Positive | 1384622 - 1385572 | 35688.8 |
| transketolase | DM102_07050 | Not Available | Positive | 1385592 - 1387595 | 73056.8 |
| duf1176 domain-containing protein | DM102_07055 | Not Available | Negative | 1387698 - 1388741 | 38764.5 |
| gdp-mannose pyrophosphatase nudk | DM102_07060 | Not Available | Negative | 1388867 - 1389442 | 21764.1 |
| oxidoreductase fes-binding subunit | DM102_07065 | Not Available | Negative | 1389510 - 1391489 | 71834.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | DM102_07070 | Not Available | Positive | 1391695 - 1393395 | 63659.6 |
| multidrug efflux rnd transporter permease subunit | DM102_07075 | Not Available | Positive | 1393559 - 1396672 | 113054.0 |
| hypothetical protein | DM102_07080 | Not Available | Negative | 1396771 - 1396830 | 2408.02 |
| arsc family reductase | DM102_07085 | Not Available | Positive | 1397211 - 1397567 | 13557.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





