Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epimerase | DM102_06330 | Not Available | Positive | 1243779 - 1244672 | 32732.8 |
| rpn family recombination-promoting nuclease/putative transposase | DM102_06335 | Not Available | Negative | 1244720 - 1245610 | 34167.4 |
| histidine transport atp-binding protein hisp | DM102_06340 | Not Available | Negative | 1245807 - 1246580 | 28626.8 |
| amino acid abc transporter permease | DM102_06345 | Not Available | Negative | 1246588 - 1247304 | 26889.3 |
| histidine abc transporter permease | DM102_06350 | Not Available | Negative | 1247301 - 1247987 | 24634.8 |
| histidine abc transporter substrate-binding protein hisj | DM102_06355 | Not Available | Negative | 1248077 - 1248859 | 28513.0 |
| lysine/arginine/ornithine abc transporter substrate-binding protein | DM102_06360 | Not Available | Negative | 1249080 - 1249862 | 27963.0 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | DM102_06365 | Not Available | Negative | 1250128 - 1250697 | 20652.2 |
| amidophosphoribosyltransferase | DM102_06370 | Not Available | Negative | 1250792 - 1252309 | 56505.3 |
| colicin v production protein | DM102_06375 | Not Available | Negative | 1252346 - 1252834 | 17991.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





