Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | DM102_05960 | Not Available | Positive | 1170611 - 1170871 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | DM102_05965 | Not Available | Negative | 1171011 - 1172096 | 38902.4 |
| dna-binding protein ybib | DM102_05970 | Not Available | Negative | 1172237 - 1173199 | 35104.7 |
| atp-dependent dna helicase ding | DM102_05975 | Not Available | Negative | 1173227 - 1175377 | 81479.9 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DM102_05985 | Not Available | Negative | 1175548 - 1175829 | 10651.8 |
| hypothetical protein | DM102_05990 | Not Available | Negative | 1175829 - 1176269 | 16290.2 |
| atp-dependent rna helicase rhle | DM102_05995 | Not Available | Negative | 1176426 - 1177790 | 50049.5 |
| transcriptional regulator | DM102_06000 | Not Available | Positive | 1178019 - 1178690 | 25018.1 |
| secretion protein hlyd | DM102_06005 | Not Available | Positive | 1178690 - 1179688 | 36418.9 |
| abc transporter atp-binding protein | DM102_06010 | Not Available | Positive | 1179681 - 1181417 | 63124.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





