Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter atp-binding protein | DM102_05635 | Not Available | Negative | 1105830 - 1106963 | 42055.5 |
| putrescine-binding periplasmic protein | DM102_05640 | Not Available | Negative | 1107058 - 1108170 | 40827.7 |
| putrescine/spermidine abc transporter substrate-binding protein | DM102_05645 | Not Available | Negative | 1108154 - 1108315 | 6387.65 |
| ybjn domain-containing protein | DM102_05650 | Not Available | Negative | 1108521 - 1108997 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DM102_05655 | Not Available | Negative | 1109085 - 1109987 | 32438.5 |
| oxygen-insensitive nadph nitroreductase | DM102_05660 | Not Available | Negative | 1110048 - 1110770 | 26862.1 |
| duf1418 family protein | DM102_05665 | Not Available | Negative | 1110754 - 1111041 | 10523.4 |
| grxa family glutaredoxin | DM102_05670 | Not Available | Positive | 1111201 - 1111458 | 9695.39 |
| hypothetical protein | DM102_05675 | Not Available | Negative | 1111488 - 1111865 | 14204.0 |
| transporter | DM102_05680 | Not Available | Positive | 1112135 - 1113820 | 60355.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





