Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylphosphatase | DM102_05145 | Not Available | Negative | 1004333 - 1004611 | 10314.4 |
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | DM102_05150 | Not Available | Positive | 1004706 - 1005896 | 44370.5 |
| heat-shock protein hspq | DM102_05155 | Not Available | Positive | 1005954 - 1006271 | 11779.9 |
| coa-binding protein | DM102_05160 | Not Available | Negative | 1006316 - 1006729 | 14716.0 |
| duf2057 family protein | DM102_05165 | Not Available | Positive | 1006902 - 1007564 | 24595.5 |
| methylglyoxal synthase | DM102_05170 | Not Available | Positive | 1007660 - 1008118 | 16919.6 |
| dna helicase iv | DM102_05175 | Not Available | Negative | 1008150 - 1010204 | 77880.4 |
| yccf domain-containing protein | DM102_05180 | Not Available | Positive | 1010327 - 1010773 | 16276.3 |
| tigr01666 family membrane protein | DM102_05185 | Not Available | Positive | 1010792 - 1012945 | 81687.3 |
| protein sxy | DM102_05190 | Not Available | Negative | 1012908 - 1013537 | 24148.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





