Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit 1 | DM102_05095 | Not Available | Negative | 995391 - 996935 | 58024.3 |
| hydrogenase expression/formation protein | DM102_05100 | Not Available | Negative | 997069 - 997926 | 31404.4 |
| hydrogenase-1 operon protein hyae | DM102_05105 | Not Available | Negative | 997923 - 998321 | 14919.7 |
| hydrogenase 1 maturation protease | DM102_05110 | Not Available | Negative | 998318 - 998905 | 21585.8 |
| ni/fe-hydrogenase b-type cytochrome subunit | DM102_05115 | Not Available | Negative | 998902 - 999609 | 27598.8 |
| hydrogenase 1 large subunit | DM102_05120 | Not Available | Negative | 999628 - 1001421 | 66287.1 |
| hydrogenase-1 small chain | DM102_05125 | Not Available | Negative | 1001418 - 1002536 | 40683.6 |
| Trna-ser | Not Available | Not Available | Positive | 1002963 - 1003050 | Not Available |
| bax inhibitor protein | DM102_05135 | Not Available | Positive | 1003257 - 1003916 | 23364.3 |
| sulfurtransferase tuse | DM102_05140 | Not Available | Positive | 1004007 - 1004336 | 12411.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





