Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iia | DM102_04380 | Not Available | Positive | 870323 - 870763 | 16509.9 |
| polysaccharide deacetylase family protein | DM102_04385 | Not Available | Positive | 870827 - 872056 | 46368.9 |
| aspartate 1-decarboxylase | DM102_04390 | Not Available | Negative | 872060 - 872440 | 13834.5 |
| hypothetical protein | DM102_04395 | Not Available | Positive | 872390 - 872593 | 7675.38 |
| rpn family recombination-promoting nuclease/putative transposase | DM102_04400 | Not Available | Positive | 872714 - 873658 | 36491.9 |
| transposase | DM102_04405 | Not Available | Positive | 873727 - 873942 | 8306.08 |
| pantoate--beta-alanine ligase | DM102_04410 | Not Available | Negative | 874024 - 874875 | 31622.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DM102_04415 | Not Available | Negative | 874887 - 875681 | 28210.1 |
| fimbrial-like adhesin | DM102_04420 | Not Available | Negative | 875795 - 876943 | 41596.3 |
| is1 family transposase | DM102_04425 | Not Available | Positive | 876993 - 877064 | 2357.77 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





