Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DM102_04020 | Not Available | Negative | 793044 - 794546 | 56104.1 |
| ribulokinase | DM102_04025 | Not Available | Negative | 794557 - 796257 | 61215.7 |
| arabinose operon regulatory protein | DM102_04035 | Not Available | Positive | 796596 - 797474 | 33385.8 |
| deda family protein | DM102_04040 | Not Available | Positive | 797560 - 798324 | 28217.8 |
| thiamine abc transporter atp-binding protein thiq | DM102_04045 | Not Available | Negative | 798438 - 799136 | 25045.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DM102_04050 | Not Available | Negative | 799120 - 800730 | 59390.6 |
| thiamine abc transporter substrate binding subunit | DM102_04055 | Not Available | Negative | 800706 - 801689 | 36194.2 |
| type iii effector | DM102_04060 | Not Available | Positive | 802061 - 802630 | 21534.3 |
| transcriptional regulator sgrr | DM102_04065 | Not Available | Negative | 802860 - 804518 | 64184.9 |
| glucose uptake inhibitor sgrt | DM102_04070 | Not Available | Positive | 804607 - 804738 | 5324.44 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





