Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | DM102_03860 | Not Available | Positive | 756610 - 759828 | 117807.0 |
| hypothetical protein | DM102_03865 | Not Available | Negative | 759836 - 760054 | 8212.92 |
| transcriptional activatory protein caif | DM102_03870 | Not Available | Positive | 760089 - 760484 | 15423.0 |
| carnitine operon protein caie | DM102_03875 | Not Available | Negative | 760603 - 761193 | 21176.6 |
| carnitinyl-coa dehydratase | DM102_03880 | Not Available | Negative | 761199 - 761984 | 28177.8 |
| atp-dependent acyl-coa ligase | DM102_03885 | Not Available | Negative | 762093 - 763646 | 58594.4 |
| l-carnitine coa-transferase | DM102_03890 | Not Available | Negative | 763720 - 764937 | 45103.3 |
| crotonobetainyl-coa dehydrogenase | DM102_03895 | Not Available | Negative | 765066 - 766208 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | DM102_03900 | Not Available | Negative | 766239 - 767753 | 56608.4 |
| protein fixa | DM102_03905 | Not Available | Positive | 768226 - 768996 | 27173.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





