Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DM102_03455 | Not Available | Positive | 681103 - 681828 | 27033.6 |
| helix-turn-helix transcriptional regulator | DM102_03460 | Not Available | Positive | 681786 - 682463 | 25593.1 |
| hydroxamate siderophore iron reductase fhuf | DM102_03465 | Not Available | Negative | 682501 - 683289 | 30012.2 |
| duf1435 domain-containing protein | DM102_03470 | Not Available | Positive | 683391 - 683666 | 10230.4 |
| Trna-leu | Not Available | Not Available | Positive | 683705 - 683791 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 683826 - 683912 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 683941 - 684027 | Not Available |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | DM102_03490 | Not Available | Negative | 684227 - 685258 | 37669.8 |
| dna polymerase iii subunit psi | DM102_03495 | Not Available | Positive | 685361 - 685774 | 15254.4 |
| ribosomal-protein-alanine n-acetyltransferase rimi | DM102_03500 | Not Available | Positive | 685743 - 686189 | 16610.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





