Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ZRUEC59 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1314101 bp
Thymine Count
1324371 bp
Guanine Count
1330283 bp
Cytosine Count
1365913 bp
Genome Length
5334668 bp
Protein-coding Genes
5013 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | DM102_03355 | Not Available | Negative | 658563 - 660125 | 58868.0 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | DM102_03360 | Not Available | Negative | 660376 - 661266 | 34332.0 |
| 4-hydroxyphenylacetate permease | DM102_03365 | Not Available | Negative | 661276 - 662652 | 50615.7 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | DM102_03370 | Not Available | Negative | 662770 - 663558 | 28088.8 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | DM102_03375 | Not Available | Negative | 663569 - 664372 | 29716.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | DM102_03380 | Not Available | Negative | 664440 - 664820 | 14360.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | DM102_03385 | Not Available | Negative | 664830 - 665681 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | DM102_03390 | Not Available | Negative | 665683 - 667149 | 53030.7 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | DM102_03395 | Not Available | Negative | 667146 - 668441 | 47400.4 |
| homoprotocatechuate degradation operon regulator hpar | DM102_03400 | Not Available | Positive | 668653 - 669153 | 19526.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





