Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Recombination protein | C1I57_01095 | Not Available | Negative | 224252 - 224857 | 22323.1 |
| Kil protein | C1I57_01100 | Not Available | Negative | 225114 - 225266 | 5886.32 |
| Ciii protein | C1I57_01105 | Not Available | Negative | 225251 - 225382 | 4910.23 |
| Hypothetical protein | C1I57_01110 | Not Available | Negative | 225407 - 226376 | 33728.8 |
| Gene 34 protein | C1I57_01115 | Not Available | Negative | 226566 - 226988 | 15722.2 |
| Restriction alleviation protein | C1I57_01120 | Not Available | Negative | 227047 - 227247 | 7634.29 |
| Probable regulatory protein n (early gene regulator) | C1I57_01125 | Not Available | Negative | 227326 - 227625 | 11366.0 |
| Repressor protein | C1I57_01130 | Not Available | Negative | 228147 - 228797 | 24043.0 |
| Regulatory protein cro (antirepressor) | C1I57_01135 | Not Available | Positive | 228878 - 229063 | 6787.1 |
| Cii protein | C1I57_01140 | Not Available | Positive | 229172 - 229465 | 11058.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





