Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | C1I57_03780 | Not Available | Positive | 689033 - 689758 | 25971.9 |
| ribosome-recycling factor | C1I57_03785 | Not Available | Positive | 689908 - 690465 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C1I57_03790 | Not Available | Positive | 690557 - 691704 | 41648.4 |
| aldo/keto reductase | C1I57_03795 | Not Available | Negative | 691705 - 692534 | 31125.2 |
| arac family transcriptional regulator | C1I57_03800 | Not Available | Positive | 692734 - 693624 | 35330.4 |
| intimin-like adhesin fdec | C1I57_03810 | Not Available | Negative | 693749 - 697996 | 149806.0 |
| aldo/keto reductase | C1I57_03815 | Not Available | Positive | 698562 - 699413 | 31883.2 |
| aldo/keto reductase | C1I57_03820 | Not Available | Positive | 699440 - 700429 | 36238.5 |
| lysr family transcriptional regulator | C1I57_03825 | Not Available | Negative | 700460 - 701395 | 34821.9 |
| lysr family transcriptional regulator | C1I57_03830 | Not Available | Negative | 701553 - 702479 | 34328.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





