Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C1I57_03720 | Not Available | Negative | 676513 - 677211 | 24355.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | C1I57_03725 | Not Available | Positive | 677295 - 678812 | 59377.2 |
| serine endoprotease degq | C1I57_03735 | Not Available | Positive | 678942 - 680366 | 49342.3 |
| cdar family transcriptional regulator | C1I57_03740 | Not Available | Positive | 680544 - 681674 | 42619.8 |
| hypothetical protein | C1I57_03745 | Not Available | Negative | 681728 - 682114 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C1I57_03750 | Not Available | Negative | 682424 - 683248 | 29892.8 |
| [protein-pii] uridylyltransferase | C1I57_03755 | Not Available | Negative | 683279 - 685951 | 102376.0 |
| methionine aminopeptidase | C1I57_03760 | Not Available | Negative | 686013 - 686807 | 29332.5 |
| 30s ribosomal protein s2 | C1I57_03770 | Not Available | Positive | 687175 - 687900 | 26745.2 |
| elongation factor ts | C1I57_03775 | Not Available | Positive | 688035 - 688886 | 30424.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





