Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | C1I57_03620 | Not Available | Positive | 655369 - 655662 | 10646.9 |
| acid stress protein ibag | C1I57_03625 | Not Available | Positive | 655822 - 656076 | 9452.29 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | C1I57_03630 | Not Available | Positive | 656131 - 657390 | 44820.4 |
| sugar fermentation stimulation protein b | C1I57_03635 | Not Available | Negative | 657438 - 657716 | 10495.6 |
| octaprenyl-diphosphate synthase | C1I57_03640 | Not Available | Negative | 657949 - 658920 | 35205.1 |
| 50s ribosomal protein l21 | C1I57_03645 | Not Available | Positive | 659179 - 659490 | 11565.0 |
| 50s ribosomal protein l27 | C1I57_03650 | Not Available | Positive | 659511 - 659768 | 9125.01 |
| eama family transporter | C1I57_03655 | Not Available | Positive | 659895 - 660860 | 34980.2 |
| gtpase obge | C1I57_03660 | Not Available | Positive | 660876 - 662048 | 43258.2 |
| serine-type d-ala-d-ala carboxypeptidase | C1I57_03665 | Not Available | Negative | 662089 - 662994 | 32946.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





