Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C1I57_03570 | Not Available | Negative | 647956 - 648681 | 26802.3 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | C1I57_03575 | Not Available | Negative | 648688 - 649245 | 20128.1 |
| lps export abc transporter periplasmic protein lptc | C1I57_03580 | Not Available | Negative | 649214 - 649789 | 21703.8 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | C1I57_03585 | Not Available | Negative | 649786 - 650352 | 20016.3 |
| arabinose 5-phosphate isomerase kdsd | C1I57_03590 | Not Available | Negative | 650373 - 651359 | 35198.3 |
| calcium/sodium antiporter | C1I57_03595 | Not Available | Negative | 651373 - 652350 | 34770.9 |
| phospholipid abc transporter atp-binding protein mlaf | C1I57_03600 | Not Available | Positive | 652560 - 653369 | 29098.6 |
| phospholipid abc transporter permease | C1I57_03605 | Not Available | Positive | 653377 - 654159 | 27865.0 |
| outer membrane lipid asymmetry maintenance protein mlad | C1I57_03610 | Not Available | Positive | 654164 - 654715 | 19577.3 |
| phospholipid-binding protein mlac | C1I57_03615 | Not Available | Positive | 654734 - 655369 | 23962.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





