Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01212 family radical sam protein | C1I57_03520 | Not Available | Positive | 638576 - 639505 | 34551.5 |
| hybrid sensor histidine kinase/response regulator | C1I57_03525 | Not Available | Positive | 639601 - 641937 | 88016.0 |
| glutamine amidotransferase | C1I57_03530 | Not Available | Positive | 642167 - 642820 | 22964.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | C1I57_03535 | Not Available | Positive | 642817 - 643545 | 27341.1 |
| protein yrbl | C1I57_03540 | Not Available | Negative | 643542 - 644174 | 24334.3 |
| phosphocarrier protein npr | C1I57_03545 | Not Available | Negative | 644387 - 644659 | 9810.71 |
| rnase adaptor protein rapz | C1I57_03550 | Not Available | Negative | 644656 - 645510 | 32494.2 |
| pts iia-like nitrogen regulatory protein ptsn | C1I57_03555 | Not Available | Negative | 645556 - 646047 | 17934.6 |
| ribosome hibernation promoting factor | C1I57_03560 | Not Available | Negative | 646165 - 646452 | 10750.9 |
| rna polymerase sigma-54 factor | C1I57_03565 | Not Available | Negative | 646475 - 647908 | 53996.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





