Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_03305 | Not Available | Positive | 594095 - 594931 | 32641.5 |
| ytfj family protein | C1I57_03310 | Not Available | Positive | 594931 - 595491 | 20644.9 |
| lps export abc transporter permease lptf | C1I57_03315 | Not Available | Positive | 595522 - 596592 | 39892.1 |
| lps export abc transporter permease lptg | C1I57_03320 | Not Available | Positive | 596589 - 597668 | 39754.5 |
| 8-amino-7-oxononanoate synthase | C1I57_03325 | Not Available | Negative | 597703 - 598875 | 41913.3 |
| acyl carrier protein | C1I57_03330 | Not Available | Negative | 598875 - 599123 | 9417.69 |
| short-chain dehydrogenase | C1I57_03335 | Not Available | Negative | 599155 - 600069 | 33650.3 |
| acyl-coa synthetase | C1I57_03340 | Not Available | Negative | 600066 - 601799 | 63784.3 |
| n-acetyltransferase | C1I57_03350 | Not Available | Positive | 602161 - 602321 | 6214.62 |
| xanthine dehydrogenase fad-binding subunit xdhb | C1I57_03355 | Not Available | Negative | 602322 - 602663 | 12280.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





