Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | C1I57_03205 | Not Available | Negative | 576194 - 577234 | 38900.5 |
| dienelactone hydrolase family protein | C1I57_03210 | Not Available | Positive | 577352 - 578278 | 34147.6 |
| duf2623 domain-containing protein | C1I57_03215 | Not Available | Positive | 578397 - 578684 | 10946.1 |
| hypothetical protein | C1I57_03220 | Not Available | Positive | 578681 - 578866 | 6965.43 |
| hydrogenase-2 small chain | C1I57_03225 | Not Available | Positive | 578873 - 579991 | 39654.3 |
| 4fe-4s dicluster domain-containing protein | C1I57_03230 | Not Available | Positive | 579994 - 580980 | 35960.9 |
| ni/fe-hydrogenase b-type cytochrome subunit | C1I57_03235 | Not Available | Positive | 580970 - 582148 | 43618.7 |
| hydrogenase 2 large subunit | C1I57_03240 | Not Available | Positive | 582145 - 583848 | 62508.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | C1I57_03245 | Not Available | Positive | 583848 - 584342 | 17739.8 |
| hydrogenase-2 operon protein hybe | C1I57_03250 | Not Available | Positive | 584335 - 584823 | 17964.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





