Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit ii | C1I57_02785 | Not Available | Negative | 505605 - 506552 | 34943.2 |
| muropeptide transporter ampg | C1I57_02790 | Not Available | Negative | 507012 - 508487 | 53262.4 |
| hypothetical protein | C1I57_02795 | Not Available | Negative | 508531 - 509109 | 20951.3 |
| polymerase | C1I57_02800 | Not Available | Negative | 509171 - 509290 | 4789.67 |
| protein bola | C1I57_02805 | Not Available | Positive | 509414 - 509731 | 11994.3 |
| hypothetical protein | C1I57_02810 | Not Available | Positive | 509665 - 509928 | 10015.4 |
| trigger factor | C1I57_02815 | Not Available | Positive | 510075 - 511373 | 48253.4 |
| atp-dependent clp protease proteolytic subunit | C1I57_02820 | Not Available | Positive | 511619 - 512242 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | C1I57_02825 | Not Available | Positive | 512368 - 513642 | 46358.7 |
| lon protease | C1I57_02830 | Not Available | Positive | 513830 - 516184 | 87443.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





