Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | C1I57_02625 | Not Available | Negative | 472353 - 473287 | 33198.9 |
| Trna-leu | Not Available | Not Available | Positive | 473483 - 473567 | Not Available |
| duf4102 domain-containing protein | C1I57_02635 | Not Available | Positive | 473768 - 475036 | 48365.3 |
| duf1819 domain-containing protein | C1I57_02640 | Not Available | Positive | 475608 - 476225 | 23134.0 |
| duf1788 domain-containing protein | C1I57_02645 | Not Available | Positive | 476222 - 476824 | 23352.5 |
| brex system p-loop protein brxc | C1I57_02650 | Not Available | Positive | 476837 - 480451 | 137124.0 |
| brex-1 system adenine-specific dna-methyltransferase pglx | C1I57_02655 | Not Available | Positive | 480500 - 484156 | 139344.0 |
| abc transporter atp-binding protein | C1I57_02660 | Not Available | Positive | 484156 - 485277 | 41414.0 |
| hypothetical protein | C1I57_02665 | Not Available | Positive | 485271 - 485840 | 21041.1 |
| brex-1 system phosphatase pglz type a | C1I57_02670 | Not Available | Positive | 485840 - 488437 | 99396.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





