Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_02575 | Not Available | Negative | 463076 - 463321 | 9376.35 |
| cadaverine/lysine antiporter | C1I57_02580 | Not Available | Positive | 463551 - 464885 | 46667.8 |
| lysine decarboxylase cada | C1I57_02585 | Not Available | Positive | 464965 - 467112 | 81250.7 |
| mfs transporter | C1I57_02590 | Not Available | Positive | 467171 - 468628 | 52980.8 |
| lysine--trna ligase heat inducible | C1I57_02595 | Not Available | Positive | 468865 - 470382 | 57858.0 |
| duf2566 domain-containing protein | C1I57_02600 | Not Available | Negative | 470501 - 470674 | 6555.44 |
| endoribonuclease ghos | C1I57_02605 | Not Available | Negative | 470702 - 470998 | 11441.5 |
| n-acetyltransferase | C1I57_02610 | Not Available | Negative | 471227 - 471499 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | C1I57_02615 | Not Available | Negative | 471511 - 471741 | 8564.34 |
| two-component system sensor histidine kinase dcus | C1I57_02620 | Not Available | Positive | 471922 - 472352 | 16059.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





