Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage major capsid protein | C1I57_01465 | Not Available | Negative | 276500 - 277669 | 42813.5 |
| hypothetical protein | C1I57_01470 | Not Available | Positive | 278067 - 278693 | 23723.3 |
| Hypothetical protein | C1I57_01475 | Not Available | Positive | 278723 - 279232 | 18352.2 |
| hypothetical protein | C1I57_01480 | Not Available | Negative | 279267 - 279527 | 10026.1 |
| Dna primase | C1I57_01485 | Not Available | Negative | 279912 - 281729 | 67616.8 |
| duf4222 domain-containing protein | C1I57_01490 | Not Available | Negative | 281726 - 282025 | 11620.1 |
| hypothetical protein | C1I57_01495 | Not Available | Negative | 282032 - 282352 | 11639.8 |
| hypothetical protein | C1I57_01500 | Not Available | Negative | 282345 - 283259 | 33548.6 |
| Transcriptional regulator | C1I57_01505 | Not Available | Negative | 283268 - 283489 | 8615.45 |
| hypothetical protein | C1I57_01510 | Not Available | Negative | 283579 - 284316 | 27232.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





