Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-methionine/branched-chain amino acid transporter | C1I57_02525 | Not Available | Positive | 453169 - 454425 | 44715.1 |
| membrane protein fxsa | C1I57_02530 | Not Available | Negative | 454441 - 454917 | 17679.1 |
| aspartate ammonia-lyase | C1I57_02535 | Not Available | Positive | 455254 - 456690 | 52359.2 |
| anaerobic c4-dicarboxylate transporter dcua | C1I57_02540 | Not Available | Positive | 456808 - 458109 | 45753.5 |
| divalent-cation tolerance protein cuta | C1I57_02545 | Not Available | Positive | 458225 - 458563 | 12361.8 |
| thiol:disulfide interchange protein dsbd | C1I57_02550 | Not Available | Positive | 458539 - 460236 | 61918.8 |
| transcriptional regulator | C1I57_02555 | Not Available | Positive | 460273 - 460848 | 21932.3 |
| Trna-phe | Not Available | Not Available | Positive | 460955 - 461030 | Not Available |
| hypothetical protein | C1I57_02565 | Not Available | Negative | 461142 - 461360 | 8097.88 |
| transcriptional regulator cadc | C1I57_02570 | Not Available | Positive | 461647 - 463185 | 57876.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





