Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_40065 | Not Available | Negative | 6077568 - 6077785 | 7328.29 |
| electron transport complex subunit rsxc | C1I57_40070 | Not Available | Negative | 6077786 - 6078003 | 7910.35 |
| hypothetical protein | C1I57_40075 | Not Available | Negative | 6078004 - 6078204 | 7759.37 |
| glutamyl-trna synthetase | C1I57_40080 | Not Available | Positive | 6078434 - 6078514 | 3003.59 |
| hypothetical protein | C1I57_40085 | Not Available | Negative | 6078565 - 6078645 | 3006.53 |
| head decoration protein | C1I57_40090 | Not Available | Positive | 6078646 - 6078857 | 7219.56 |
| hypothetical protein | C1I57_40095 | Not Available | Positive | 6078858 - 6079068 | 6945.75 |
| cell division topological specificity factor mine | C1I57_40100 | Not Available | Negative | 6079207 - 6079279 | 2584.01 |
| antibiotic transporter | C1I57_40105 | Not Available | Negative | 6079624 - 6079700 | 2787.8 |
| hypothetical protein | C1I57_40115 | Not Available | Positive | 6080116 - 6080321 | 7847.24 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





