Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | C1I57_39960 | Not Available | Negative | 6071127 - 6071203 | 2851.55 |
| isocitrate lyase | C1I57_39965 | Not Available | Negative | 6071289 - 6071369 | 2658.01 |
| padr family transcriptional regulator | C1I57_39970 | Not Available | Negative | 6071537 - 6071611 | 2672.26 |
| hypothetical protein | C1I57_39975 | Not Available | Positive | 6071612 - 6071853 | 7958.04 |
| voltage-gated clc-type chloride channel clcb | C1I57_39980 | Not Available | Positive | 6071854 - 6072093 | 8382.53 |
| hypothetical protein | C1I57_39985 | Not Available | Positive | 6072333 - 6072570 | 8741.6 |
| nickel-responsive transcriptional regulator nikr | C1I57_39990 | Not Available | Positive | 6072571 - 6072646 | 2742.22 |
| abc transporter | C1I57_39995 | Not Available | Negative | 6072655 - 6072807 | 5529.95 |
| hypothetical protein | C1I57_40000 | Not Available | Negative | 6072808 - 6073041 | 7795.75 |
| antirestriction protein | C1I57_40005 | Not Available | Negative | 6073042 - 6073254 | 7713.08 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





