Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | C1I57_39840 | Not Available | Positive | 6063469 - 6063591 | 4612.79 |
| conjugal transfer protein trar | C1I57_39850 | Not Available | Negative | 6064324 - 6064452 | 4738.59 |
| outer membrane protein ompw | C1I57_39860 | Not Available | Negative | 6064731 - 6064991 | 9795.32 |
| phage portal protein | C1I57_39865 | Not Available | Positive | 6064992 - 6065260 | 9908.89 |
| cyclic diguanylate phosphodiesterase | C1I57_39870 | Not Available | Negative | 6065364 - 6065526 | 5807.16 |
| hypothetical protein | C1I57_39875 | Not Available | Negative | 6065629 - 6065791 | 5838.18 |
| colanic acid biosynthesis glycosyltransferase wcaa | C1I57_39880 | Not Available | Positive | 6065958 - 6066055 | 3863.78 |
| biotin carboxylase | C1I57_39885 | Not Available | Positive | 6066056 - 6066199 | 5434.56 |
| hypothetical protein | C1I57_39890 | Not Available | Positive | 6066319 - 6066580 | 8798.89 |
| phage portal protein | C1I57_39900 | Not Available | Negative | 6066842 - 6067102 | 9671.39 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





