Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | C1I57_39785 | Not Available | Negative | 6059945 - 6060234 | 11143.0 |
| padr family transcriptional regulator | C1I57_39790 | Not Available | Negative | 6060449 - 6060523 | 2672.26 |
| hypothetical protein | C1I57_39795 | Not Available | Positive | 6060524 - 6060670 | 5050.58 |
| Trna-glu | Not Available | Not Available | Positive | 6060876 - 6060951 | Not Available |
| phage tail tape measure protein | C1I57_39810 | Not Available | Positive | 6061100 - 6061383 | 10414.0 |
| hypothetical protein | C1I57_39815 | Not Available | Negative | 6061405 - 6061665 | 9934.28 |
| hypothetical protein | C1I57_39820 | Not Available | Negative | 6061948 - 6062228 | 10429.2 |
| ribonucleoside-diphosphate reductase | C1I57_39825 | Not Available | Positive | 6062229 - 6062300 | 2408.65 |
| ribonucleoside-triphosphate reductase | C1I57_39830 | Not Available | Positive | 6062447 - 6062509 | 2484.95 |
| hypothetical protein | C1I57_39835 | Not Available | Negative | 6062510 - 6062790 | 9988.72 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





