Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase | C1I57_39635 | Not Available | Negative | 6051622 - 6051756 | 4988.87 |
| cytochrome c nitrite reductase fe-s protein | C1I57_39640 | Not Available | Negative | 6051757 - 6051935 | 6276.71 |
| cytochrome c nitrite reductase | C1I57_39645 | Not Available | Negative | 6051932 - 6052066 | 4988.87 |
| carbamoyltransferase hypf | C1I57_39650 | Not Available | Negative | 6052067 - 6052376 | 11130.3 |
| multidrug/spermidine transporter subunit mdtj | C1I57_39655 | Not Available | Negative | 6052377 - 6052516 | 5072.45 |
| agmatinase | C1I57_39660 | Not Available | Positive | 6052686 - 6052862 | 6146.53 |
| 5-formyltetrahydrofolate cyclo-ligase | C1I57_39665 | Not Available | Negative | 6052995 - 6053303 | 11989.7 |
| multidrug/spermidine transporter subunit mdtj | C1I57_39670 | Not Available | Negative | 6053304 - 6053443 | 5072.45 |
| agmatinase | C1I57_39675 | Not Available | Positive | 6053613 - 6053789 | 6146.53 |
| mannosyl-3-phosphoglycerate phosphatase | C1I57_39680 | Not Available | Negative | 6053922 - 6054002 | 3156.67 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





