Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | C1I57_39480 | Not Available | Negative | 6042437 - 6042747 | 11677.2 |
| sugar abc transporter permease | C1I57_39485 | Not Available | Positive | 6042748 - 6043058 | 12092.6 |
| pts ascorbate transporter subunit iic | C1I57_39490 | Not Available | Positive | 6043059 - 6043369 | 11350.9 |
| hypothetical protein | C1I57_39495 | Not Available | Negative | 6043370 - 6043680 | 10965.2 |
| hypothetical protein | C1I57_39500 | Not Available | Negative | 6043681 - 6043991 | 12314.9 |
| pts ascorbate transporter subunit iic | C1I57_39505 | Not Available | Positive | 6043992 - 6044302 | 11350.9 |
| purine-nucleoside phosphorylase | C1I57_39515 | Not Available | Negative | 6044614 - 6044924 | 11436.1 |
| putative selenate reductase subunit ygfk | C1I57_39520 | Not Available | Positive | 6044925 - 6045235 | 11420.6 |
| 4-phosphoerythronate dehydrogenase | C1I57_39525 | Not Available | Negative | 6045236 - 6045546 | 11792.1 |
| excinuclease abc subunit b | C1I57_39530 | Not Available | Positive | 6045547 - 6045857 | 12134.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





