Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | C1I57_39280 | Not Available | Positive | 6030846 - 6031013 | 6161.96 |
| hypothetical protein | C1I57_39285 | Not Available | Positive | 6031003 - 6031160 | 6046.03 |
| duf1097 domain-containing protein | C1I57_39290 | Not Available | Positive | 6031161 - 6031256 | 3261.89 |
| lysr family transcriptional regulator | C1I57_39295 | Not Available | Positive | 6031348 - 6031475 | 4589.43 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C1I57_39300 | Not Available | Negative | 6031476 - 6031790 | 11853.0 |
| integrase | C1I57_39305 | Not Available | Positive | 6031866 - 6032105 | 9118.17 |
| metal-binding protein zint | C1I57_39310 | Not Available | Positive | 6032106 - 6032420 | 12070.0 |
| anhydro-n-acetylmuramic acid kinase | C1I57_39315 | Not Available | Negative | 6032421 - 6032734 | 11280.6 |
| d-hexose-6-phosphate mutarotase | C1I57_39320 | Not Available | Positive | 6032735 - 6033048 | 11508.6 |
| hypothetical protein | C1I57_39325 | Not Available | Negative | 6033049 - 6033362 | 10913.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





