Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease viii | C1I57_39130 | Not Available | Positive | 6023249 - 6023504 | 9401.11 |
| transporter | C1I57_39135 | Not Available | Negative | 6023501 - 6023566 | 2246.8 |
| endonuclease viii | C1I57_39140 | Not Available | Positive | 6023567 - 6023822 | 9414.15 |
| transporter | C1I57_39145 | Not Available | Negative | 6023819 - 6023884 | 2246.8 |
| deaminase | C1I57_39150 | Not Available | Negative | 6023885 - 6024201 | 11960.5 |
| aspartate carbamoyltransferase regulatory subunit | C1I57_39155 | Not Available | Negative | 6024202 - 6024506 | 11448.9 |
| l-ribulose-5-phosphate 4-epimerase | C1I57_39160 | Not Available | Negative | 6024519 - 6024835 | 11487.3 |
| l-ribulose-5-phosphate 4-epimerase | C1I57_39165 | Not Available | Negative | 6024836 - 6025152 | 11486.4 |
| putative lateral flagellar export/assembly protein lafu | C1I57_39170 | Not Available | Positive | 6025159 - 6025469 | 11156.5 |
| aminopeptidase | C1I57_39175 | Not Available | Positive | 6025470 - 6025786 | 11572.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





