Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_39080 | Not Available | Positive | 6020395 - 6020544 | 5689.84 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | C1I57_39085 | Not Available | Negative | 6020705 - 6021022 | 11834.5 |
| hypothetical protein | C1I57_39090 | Not Available | Positive | 6021031 - 6021180 | 5674.89 |
| nadh-quinone oxidoreductase subunit g | C1I57_39095 | Not Available | Negative | 6021341 - 6021658 | 11948.2 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | C1I57_39100 | Not Available | Negative | 6021659 - 6021976 | 11844.5 |
| ribonuclease e | C1I57_39105 | Not Available | Positive | 6021977 - 6022294 | 11407.4 |
| phospholipase | C1I57_39110 | Not Available | Positive | 6022295 - 6022458 | 6412.96 |
| glucan biosynthesis protein | C1I57_39115 | Not Available | Negative | 6022466 - 6022612 | 5466.03 |
| oxidative stress defense protein | C1I57_39120 | Not Available | Positive | 6022613 - 6022909 | 10933.8 |
| hypothetical protein | C1I57_39125 | Not Available | Negative | 6023061 - 6023248 | 6654.17 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





