Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_39030 | Not Available | Negative | 6017751 - 6017833 | 2783.16 |
| rho-binding antiterminator | C1I57_39035 | Not Available | Negative | 6017834 - 6018078 | 9118.84 |
| hypothetical protein | C1I57_39040 | Not Available | Negative | 6018071 - 6018153 | 2782.22 |
| ribonuclease iii | C1I57_39045 | Not Available | Positive | 6018154 - 6018473 | 11976.3 |
| hypothetical protein | C1I57_39050 | Not Available | Positive | 6018474 - 6018793 | 12214.4 |
| glutamate racemase | C1I57_39055 | Not Available | Negative | 6018794 - 6019113 | 11863.3 |
| sensor protein zras | C1I57_39060 | Not Available | Positive | 6019114 - 6019432 | 11917.3 |
| nadh-quinone oxidoreductase subunit g | C1I57_39065 | Not Available | Negative | 6019433 - 6019750 | 11948.2 |
| oxidative stress defense protein | C1I57_39070 | Not Available | Positive | 6019751 - 6020047 | 10896.8 |
| glycine--trna ligase subunit beta | C1I57_39075 | Not Available | Negative | 6020069 - 6020386 | 11570.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





