Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family phage regulatory protein | C1I57_02075 | Not Available | Positive | 385509 - 385862 | 13499.5 |
| hypothetical protein | C1I57_02080 | Not Available | Positive | 385941 - 386558 | 24021.9 |
| hypothetical protein | C1I57_02085 | Not Available | Positive | 387032 - 387247 | 7936.31 |
| aaa family atpase | C1I57_02095 | Not Available | Negative | 387584 - 388228 | 24230.4 |
| is21-like element is100 family transposase | C1I57_02100 | Not Available | Negative | 388364 - 389386 | 39845.1 |
| transposase | C1I57_02105 | Not Available | Positive | 389532 - 389711 | 6800.19 |
| hypothetical protein | C1I57_02110 | Not Available | Negative | 389688 - 389915 | 9039.15 |
| hypothetical protein | C1I57_02115 | Not Available | Negative | 389937 - 390314 | 13889.7 |
| hypothetical protein | C1I57_02120 | Not Available | Positive | 390241 - 390501 | 10208.4 |
| hypothetical protein | C1I57_02130 | Not Available | Positive | 390883 - 392055 | 44770.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





