Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | C1I57_38880 | Not Available | Negative | 6007866 - 6008188 | 12204.3 |
| lipid kinase yegs | C1I57_38885 | Not Available | Negative | 6008189 - 6008511 | 11283.6 |
| mononuclear molybdenum enzyme yedy | C1I57_38890 | Not Available | Positive | 6008512 - 6008834 | 12321.9 |
| 5'/3'-nucleotidase sure | C1I57_38895 | Not Available | Negative | 6008835 - 6009157 | 11389.8 |
| elongation factor 4 | C1I57_38900 | Not Available | Positive | 6009481 - 6009803 | 11729.1 |
| phosphomannomutase cpsg | C1I57_38905 | Not Available | Positive | 6009804 - 6010126 | 11912.3 |
| zinc resistance-associated protein zrap | C1I57_38910 | Not Available | Negative | 6010156 - 6010449 | 10666.6 |
| hypothetical protein | C1I57_38915 | Not Available | Positive | 6010450 - 6010772 | 12021.3 |
| alpha-hydroxy-acid oxidizing enzyme | C1I57_38920 | Not Available | Positive | 6010773 - 6011095 | 11539.1 |
| hypothetical protein | C1I57_38925 | Not Available | Negative | 6011096 - 6011418 | 12296.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





