Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron permease | C1I57_38770 | Not Available | Negative | 5999752 - 6000077 | 11939.7 |
| iron permease | C1I57_38775 | Not Available | Negative | 6000078 - 6000403 | 11925.6 |
| hypothetical protein | C1I57_38780 | Not Available | Negative | 6000730 - 6001055 | 12741.1 |
| beta-aspartyl-peptidase | C1I57_38785 | Not Available | Negative | 6001056 - 6001381 | 11362.7 |
| beta-aspartyl-peptidase | C1I57_38790 | Not Available | Negative | 6001382 - 6001707 | 11291.5 |
| hydratase | C1I57_38795 | Not Available | Positive | 6001708 - 6002032 | 11852.2 |
| hydratase | C1I57_38800 | Not Available | Positive | 6002033 - 6002357 | 11824.1 |
| hypothetical protein | C1I57_38805 | Not Available | Negative | 6002358 - 6002497 | 5264.16 |
| autotransporter outer membrane beta-barrel domain-containing protein | C1I57_38810 | Not Available | Negative | 6002713 - 6003007 | 10471.2 |
| type vi secretion system baseplate subunit tssk | C1I57_38825 | Not Available | Positive | 6003658 - 6003981 | 12734.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





