Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase | C1I57_38420 | Not Available | Negative | 5977709 - 5978040 | 12491.1 |
| putrescine-ornithine antiporter | C1I57_38425 | Not Available | Negative | 5978041 - 5978372 | 11891.0 |
| ethanolamine ammonia lyase large subunit | C1I57_38430 | Not Available | Negative | 5978373 - 5978704 | 11800.0 |
| ethanolamine ammonia lyase large subunit | C1I57_38435 | Not Available | Negative | 5978705 - 5979036 | 11844.0 |
| aminopeptidase | C1I57_38440 | Not Available | Negative | 5979037 - 5979368 | 12047.3 |
| duf4153 domain-containing protein | C1I57_38445 | Not Available | Negative | 5979369 - 5979555 | 6719.39 |
| deoxyribonucleoside 5-monophosphate phosphatase | C1I57_38450 | Not Available | Negative | 5979701 - 5980023 | 12456.0 |
| glycerol-3-phosphate abc transporter substrate-binding protein | C1I57_38455 | Not Available | Negative | 5980033 - 5980364 | 11998.2 |
| glycerol-3-phosphate abc transporter substrate-binding protein | C1I57_38460 | Not Available | Negative | 5980365 - 5980696 | 11998.2 |
| fructose-bisphosphatase class ii | C1I57_38465 | Not Available | Positive | 5980697 - 5981028 | 11765.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





