Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_38220 | Not Available | Positive | 5964352 - 5964686 | 11818.0 |
| hypothetical protein | C1I57_38225 | Not Available | Negative | 5964687 - 5965021 | 12415.6 |
| n-acetyltransferase | C1I57_38230 | Not Available | Negative | 5965022 - 5965356 | 12316.5 |
| hypothetical protein | C1I57_38235 | Not Available | Negative | 5965357 - 5965691 | 12814.3 |
| serine-type d-ala-d-ala carboxypeptidase dacd | C1I57_38240 | Not Available | Positive | 5965692 - 5966026 | 12583.0 |
| amino acid permease | C1I57_38245 | Not Available | Negative | 5966027 - 5966361 | 11729.4 |
| multidrug export protein emra | C1I57_38250 | Not Available | Positive | 5966575 - 5966696 | 4713.73 |
| multidrug export protein emra | C1I57_38255 | Not Available | Positive | 5966910 - 5967031 | 4727.76 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | C1I57_38260 | Not Available | Positive | 5967032 - 5967366 | 12779.3 |
| trna epoxyqueuosine(34) reductase queg | C1I57_38265 | Not Available | Negative | 5967367 - 5967701 | 12543.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





