Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_37970 | Not Available | Negative | 5947745 - 5948085 | 12095.8 |
| l-arabinose isomerase | C1I57_37975 | Not Available | Positive | 5948086 - 5948361 | 10366.3 |
| l-arabinose isomerase | C1I57_37980 | Not Available | Positive | 5948427 - 5948702 | 10366.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C1I57_37985 | Not Available | Positive | 5948768 - 5949046 | 9915.18 |
| pts mannitol transporter subunit iibc | C1I57_37990 | Not Available | Positive | 5949109 - 5949449 | 12134.7 |
| hypothetical protein | C1I57_37995 | Not Available | Negative | 5949450 - 5949790 | 12841.0 |
| pts mannose transporter subunit iiab | C1I57_38000 | Not Available | Positive | 5949791 - 5950131 | 12296.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C1I57_38005 | Not Available | Positive | 5950132 - 5950410 | 9885.15 |
| exodeoxyribonuclease v subunit alpha | C1I57_38010 | Not Available | Negative | 5950473 - 5950813 | 12441.2 |
| molybdopterin biosynthesis protein moeb | C1I57_38015 | Not Available | Positive | 5950814 - 5951154 | 12466.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





