Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin | C1I57_37770 | Not Available | Negative | 5934677 - 5935023 | 12727.0 |
| arginine--trna ligase | C1I57_37775 | Not Available | Positive | 5935024 - 5935370 | 13057.8 |
| arginine--trna ligase | C1I57_37780 | Not Available | Positive | 5935371 - 5935717 | 13057.8 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase | C1I57_37785 | Not Available | Negative | 5935718 - 5936064 | 13415.8 |
| hypothetical protein | C1I57_37790 | Not Available | Negative | 5936065 - 5936411 | 12740.0 |
| autotransporter domain-containing protein | C1I57_37795 | Not Available | Negative | 5936450 - 5936758 | 10825.5 |
| peptidylprolyl isomerase | C1I57_37800 | Not Available | Positive | 5936759 - 5937105 | 12261.8 |
| glutamate/aspartate:proton symporter gltp | C1I57_37805 | Not Available | Negative | 5937171 - 5937452 | 9880.31 |
| hypothetical protein | C1I57_37810 | Not Available | Positive | 5937453 - 5937799 | 12962.3 |
| hypothetical protein | C1I57_37815 | Not Available | Positive | 5937800 - 5938145 | 13020.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





