Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | C1I57_37620 | Not Available | Positive | 5925601 - 5925950 | 13296.6 |
| 5-formyltetrahydrofolate cyclo-ligase | C1I57_37625 | Not Available | Positive | 5925951 - 5926112 | 6242.43 |
| type i toxin-antitoxin system ibs family toxin | C1I57_37630 | Not Available | Negative | 5926214 - 5926273 | 2219.08 |
| nad(p)-dependent oxidoreductase | C1I57_37635 | Not Available | Positive | 5926301 - 5926650 | 11844.8 |
| oxygen-independent coproporphyrinogen iii oxidase | C1I57_37640 | Not Available | Negative | 5926651 - 5927000 | 13102.5 |
| dna (cytosine-5-)-methyltransferase | C1I57_37645 | Not Available | Positive | 5927001 - 5927350 | 13020.7 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | C1I57_37650 | Not Available | Positive | 5927351 - 5927700 | 13266.6 |
| oxygen-independent coproporphyrinogen iii oxidase | C1I57_37655 | Not Available | Negative | 5927701 - 5928050 | 13102.5 |
| nad(p)-dependent oxidoreductase | C1I57_37660 | Not Available | Positive | 5928051 - 5928400 | 11834.7 |
| small toxic polypeptide ldra/ldrc | C1I57_37665 | Not Available | Negative | 5928427 - 5928534 | 3984.01 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





