Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potc | C1I57_37570 | Not Available | Negative | 5922783 - 5923135 | 13286.7 |
| 30s ribosomal protein s6--l-glutamate ligase | C1I57_37575 | Not Available | Positive | 5923136 - 5923488 | 12467.0 |
| 30s ribosomal protein s6--l-glutamate ligase | C1I57_37580 | Not Available | Positive | 5923489 - 5923841 | 12513.1 |
| hypothetical protein | C1I57_37585 | Not Available | Negative | 5923954 - 5924193 | 8556.35 |
| hypothetical protein | C1I57_37590 | Not Available | Negative | 5924333 - 5924545 | 7294.85 |
| type ii secretion system protein gspj | C1I57_37595 | Not Available | Positive | 5924546 - 5924897 | 12718.6 |
| hypothetical protein | C1I57_37600 | Not Available | Positive | 5924898 - 5925050 | 5235.54 |
| aminopeptidase | C1I57_37605 | Not Available | Positive | 5925050 - 5925249 | 7370.9 |
| hypothetical protein | C1I57_37610 | Not Available | Positive | 5925250 - 5925388 | 4974.81 |
| o-acetyltransferase | C1I57_37615 | Not Available | Negative | 5925430 - 5925600 | 6445.19 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





