Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anion permease | C1I57_37370 | Not Available | Positive | 5909645 - 5909836 | 6700.55 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C1I57_37375 | Not Available | Negative | 5909879 - 5910001 | 4149.05 |
| hypothetical protein | C1I57_37380 | Not Available | Positive | 5910002 - 5910193 | 6760.68 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C1I57_37385 | Not Available | Negative | 5910236 - 5910358 | 4149.05 |
| hypothetical protein | C1I57_37390 | Not Available | Positive | 5910359 - 5910523 | 5742.9 |
| mfs transporter | C1I57_37395 | Not Available | Negative | 5910527 - 5910715 | 6484.13 |
| hypothetical protein | C1I57_37400 | Not Available | Positive | 5910716 - 5910880 | 5742.9 |
| mfs transporter | C1I57_37405 | Not Available | Negative | 5910884 - 5911072 | 6508.11 |
| zinc/cadmium/mercury/lead-transporting atpase | C1I57_37410 | Not Available | Positive | 5911073 - 5911428 | 12656.7 |
| aldehyde:ferredoxin oxidoreductase | C1I57_37415 | Not Available | Negative | 5911785 - 5912140 | 13428.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





