Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylenetetrahydrofolate reductase | C1I57_37315 | Not Available | Positive | 5905707 - 5905802 | 3582.32 |
| duf4153 domain-containing protein | C1I57_37320 | Not Available | Positive | 5906072 - 5906424 | 13612.2 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | C1I57_37325 | Not Available | Negative | 5906425 - 5906697 | 9642.57 |
| sdr family oxidoreductase | C1I57_37330 | Not Available | Negative | 5906901 - 5907140 | 8256.9 |
| hypothetical protein | C1I57_37335 | Not Available | Negative | 5907301 - 5907498 | 7317.75 |
| oxidoreductase | C1I57_37340 | Not Available | Positive | 5907499 - 5907780 | 10275.5 |
| ferric-rhodotorulic acid/ferric-coprogen receptor fhue | C1I57_37345 | Not Available | Negative | 5907857 - 5908140 | 10124.8 |
| hypothetical protein | C1I57_37350 | Not Available | Negative | 5908215 - 5908498 | 10094.8 |
| transketolase | C1I57_37360 | Not Available | Negative | 5908931 - 5909287 | 13435.7 |
| transketolase | C1I57_37365 | Not Available | Negative | 5909288 - 5909644 | 13349.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





