Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C1I57_37165 | Not Available | Negative | 5894552 - 5894913 | 13053.5 |
| hypothetical protein | C1I57_37170 | Not Available | Positive | 5894914 - 5895275 | 13794.4 |
| o-acetyl-adp-ribose deacetylase | C1I57_37175 | Not Available | Positive | 5895276 - 5895637 | 13235.6 |
| tmao reductase two-component system sensor histidine kinase tors | C1I57_37180 | Not Available | Positive | 5895638 - 5895999 | 12962.6 |
| tmao reductase two-component system sensor histidine kinase tors | C1I57_37185 | Not Available | Positive | 5896000 - 5896361 | 12918.5 |
| fimbrial protein | C1I57_37190 | Not Available | Negative | 5896362 - 5896549 | 6827.2 |
| nadph-dependent 2,4-dienoyl-coa reductase | C1I57_37195 | Not Available | Positive | 5896723 - 5897083 | 13146.8 |
| fimbrial protein | C1I57_37200 | Not Available | Negative | 5897084 - 5897271 | 6827.2 |
| colanic acid biosynthesis glycosyltransferase wcae | C1I57_37205 | Not Available | Negative | 5897806 - 5898165 | 13399.7 |
| signal recognition particle-docking protein ftsy | C1I57_37210 | Not Available | Negative | 5898166 - 5898525 | 12934.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





