Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_37115 | Not Available | Negative | 5891290 - 5891510 | 7940.49 |
| aminoalkylphosphonic acid n-acetyltransferase | C1I57_37120 | Not Available | Negative | 5891512 - 5891652 | 5469.28 |
| threonine--trna ligase | C1I57_37125 | Not Available | Positive | 5891653 - 5892015 | 13741.6 |
| dihydropyrimidinase | C1I57_37130 | Not Available | Positive | 5892016 - 5892378 | 13283.9 |
| dihydropyrimidinase | C1I57_37135 | Not Available | Positive | 5892379 - 5892741 | 13300.0 |
| hypothetical protein | C1I57_37140 | Not Available | Positive | 5892742 - 5893103 | 13794.4 |
| excinuclease abc subunit a | C1I57_37145 | Not Available | Negative | 5893104 - 5893465 | 12599.3 |
| phage n-6-adenine-methyltransferase | C1I57_37150 | Not Available | Negative | 5893466 - 5893827 | 13678.0 |
| excinuclease abc subunit a | C1I57_37155 | Not Available | Negative | 5893828 - 5894189 | 12599.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C1I57_37160 | Not Available | Negative | 5894190 - 5894551 | 13022.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





