Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_01790 | Not Available | Positive | 339305 - 339718 | 15339.1 |
| phage integrase family protein | C1I57_01795 | Not Available | Positive | 339720 - 340499 | 28994.5 |
| para family protein | C1I57_01800 | Not Available | Positive | 340679 - 341323 | 23348.4 |
| molecular chaperone groel | C1I57_01805 | Not Available | Positive | 341410 - 341718 | 10924.9 |
| recombinase | C1I57_01810 | Not Available | Positive | 342133 - 343113 | 36229.2 |
| recombinase | C1I57_01815 | Not Available | Positive | 343106 - 343522 | 15451.3 |
| repfib replication protein a | C1I57_01840 | Not Available | Positive | 345271 - 346248 | 37317.0 |
| site-specific recombinase | C1I57_01845 | Not Available | Negative | 346533 - 347273 | 28192.5 |
| serine/threonine protein kinase | C1I57_01850 | Not Available | Negative | 347394 - 347582 | 7294.7 |
| antimicrobial resistance protein mig-14 | C1I57_01855 | Not Available | Negative | 347956 - 348864 | 35303.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





